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Submissions from 2013

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Achieving the triple bottom line in the face of inherent trade-offs among social equity, economic return, and conservation, Benjamin S. Halpern, Carissa J. Klein, Christopher J. Brown, Maria Beger, Hedley S. Grantham, Sangeeta Mangubhai, Mary Ruckelshaus, Vivitskaia J. Tulloch, Matt Watts, Crow White, and Hough P. Possingham

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Marine Protected Areas and Resilience to Sedimentation in the Solomon Islands, B. S. Halpern, K. A. Selkoe, Crow White, S. Albert, S. Aswani, and M. Lauer

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Evaluating tradeoffs among ecosystem services to inform marine spatial planning, Sarah E. Lester, Christopher Costello, Benjamin S. Halpern, Steven D. Gaines, Crow White, and John A. Barth

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Phylogeography of the California sheephead, Semicossyphus pulcher: The role of deep reefs as stepping stones and pathways to antitropicality, Marloes Poortvliet, Gary C. Longo, Kimberly Selkoe, Paul H. Berber, Crow White, Jennifer E. Caselle, Alejandro Perez-Matus, Steven D. Gaines, and Giacomo Bernardi

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Evaluation of species distribution models by resampling of sites surveyed a century ago by Joseph Grinnell, Adam B. Smith, Maria J. Santos, Michelle S. Koo, Karen M.C. Rowe, Kevin C. Rowe, James L. Patton, John D. Perrine, Steven R. Beissinger, and Craig Moritz

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A Socratic Method for Surveying Students’ Readiness to Study Evolution, William D. Stansfield

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Teaching Evolution & the Nature of Science via the History of Debates about the Levels at Which Natural Selection Operates, William D. Stansfield

Submissions from 2012

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Sirtuin-induced protein deacetylation affects the heat shock response in blue mussel congeners (Mytilus), M. Beam, M. Zuzow, and L. Tomanek

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Bioluminescence in the high Arctic during the polar night, J. Berge, A.S. Båtnes, G. Johnsen, S.M. Blackwell, and Mark A. Moline

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The Proteomic Response of Mytilus californianus to Acute Oxidative Stress in the Presence of a Sirtuin Inhibitor, H. Chilton, J. Mier, M. Zuzow, and L. Tomanek

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The distribution of 4-nonylphenol in marine organisms of North American Pacific Coast estuaries, Jennifer Diehl, Sarah E. Johnson, Kang Xia, Amy West, and Lars Tomanek

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Characterization of a Vibrio fischeri Aminopeptidase and Evidence for Its Influence on an Early Stage of Squid Colonization, Pat M. Fidopiastis, Bethany A. Rader, David G. Gerling, Nestor A. Gutierrez, Katherine H. Watkins, Michelle West Frey, Spencer V. Nyholm, and Cheryl A. Whistler

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The proteomic response to acute heat stress after acclimation to fluctuating temperatures in the eurythermal porcelain crab, Petrolisthes cinctipes, Michael A. Garland, Holland Elder, David A. Hurt, Jonathon H. Stillman, and Lars Tomanek

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Gene transcripts encoding hypoxia-inducible factor (HIF) exhibit tissue- and muscle fiber type-dependent responses to hypoxia and hypercapnic hypoxia in the Atlantic blue crab, Callinectes sapidus, Kristin M. Hardy, Chandler R. Follett, Louis E. Burnett, and Sean Lema

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Proteomic response of tidal-rhythm entrained Mytilus californianus to acute aerial heat stress, D. Hernandez, M. Schuman, and L. Tomanek

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Experimentally Altered Navigational Demands Induce Changes in the Cortical Forebrain of Free-Ranging Northern Pacific Rattlesnakes (Crotalus o. oreganus), Matthew L. Holding, Julius A. Frazier, Emily N. Taylor, and Christine R. Strand

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Proteomic analysis of hyposalinity stress in the ascidian species Ciona savignyi and C. intestinalis, James S. Koman and Lars Tomanek

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Do thick leaves avoid thermal damage in critically low wind speeds?, A. Leigh, S. Sevanto, M. C. Ball, J. D. Close, D. S. Ellsworth, Charles A. Knight, A. B. Nicotra, and S. Vogel

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An experimental evaluation of the use of C3 δ13C plant tissue as a proxy for the paleoatmospheric δ13CO2 signature of air, B. H. Lomax, C. A. Knight, and J. A. Lake

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A collaborative approach to investigate site fidelity, home range, and homing behavior of cabezon (Scorpaenichthys marmoratus), Carlos Mireles, Royden Nakamura, and Dean Wendt

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Evaluation of bio-optical inversion of spectral irradiance measured from an autonomous underwater vehicle, Mark A. Moline, Ian Robbins, Brian Zelenke, W. Scott Pegau, and Hemantha Wijesekera

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How do host sex and reproductive state affect host preference and feeding duration of ticks?, Nicholas B. Pollock, Larisa K. Vredevoe, and Emily N. Taylor

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Can vertical migrations of dinoflagellates explain observed bioluminescence patterns during an upwelling event in Monterey Bay, California?, Igor Shulman, Bradley Penta, Mark A. Moline, Steven H.D. Haddock, Stephanie Anderson, Matthew J. Oliver, and Peter Sakalaukus

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Spontaneous multiscale phase separation within fluorinated xerogel coatings for fouling-release surfaces, Anastasiya Sokolova, Joseph J. Bailey, Grant T. Waltz, Lenora H. Brewer, John A. Finlay, Jill Fornalik, Dean Wendt, Maureen E. Callow, James A. Callow, Frank V. Bright, and Michael R. Detty

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Dobzhansky's Dictum: An Object Lesson for Critical Thinking, William D. Stansfield

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Science & the Senses: Perceptions & Deceptions, William D. Stansfield

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The Discovery of Insulin: A Case Study of Scientific Methodology, William D. Stansfield

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New metrics for managing and sustaining the ocean’s bounty, Heather Tallis, Sarah E. Lester, Mary Ruckelshaus, Mark Plummer, Karen McLeod, Anne Guerry, Sandy Andelman, Margaret R. Caldwell, Marc Conte, Stephen Copps, David Fox, Rod Fujita, Steven D. Gaines, Guy Gelfenbaum, Barry Gold, Peter Kareiva, Choong-ki Kim, Kai Lee, Michael Papenfus, Scott Redman, Brian Silliman, Lisa Wainger, and Crow White

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Environmental stress proteomics of two blue mussel (genus Mytilus) congeners, Lars Tomanek

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Ecosystem service tradeoff analysis reveals the value of marine spatial planning for multiple ocean uses, Crow White, Benjamin S. Halpern, and Carrie V. Kappel

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Proteomic responses of Mytilus congeners to hypo-saline stress, M. Z. Zuzow, L. Serafini, L. Hitt, J. Valenzuela, and L. Tomanek

Submissions from 2011

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SNP-Based Mapping of Crossover Recombination in Caenorhabditis elegans, Grace C. Bazan and Kenneth J. Hillers

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Exposure to Ultraviolet Radiation Causes Proteomic Changes in Embryos of the Purple Sea Urchin, Strongylocentrotus purpuratus, Joseph P. Campanale, Lars Tomanek, and Nikki L. Adams

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Addressing biased occurrence data in predicting potential Sierra Nevada red fox habitat for survey prioritization, Casey Cleve, John D. Perrine, Barbara Holzman, and Ellen Hines

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The Control of Marine Biofouling on Xerogel Surfaces with Nanometer-Scale Topography, Nikhil Gunari, Lenora H. Brewer, Stephanie M. Bennett, Anastasiya Sokolova, Nadine D. Kraut, John A. Finlay, Anne E. Meyer, Gilbert C. Walker, Dean E. Wendt, Maureen E. Callow, James A. Callow, Frank V. Bright, and Michael R. Detty

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Using portfolio theory to assess tradeoffs between return from natural capital and social equity across space, Benjamin S. Halpern, Crow White, Sarah E. Lester, Christopher Costello, and Steven D. Gaines

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Tissue-specific thyroid hormone regulation of gene transcripts encoding iodothyronine deiodinases and thyroid hormone receptors in striped parrotfish (Scarus iseri), Kaitlin M. Johnson and Sean C. Lema

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Parasite infection and sand coarseness increase sand crab (Emerita analoga) burrowing time, Gita R. Kolluru, Zachary S. Green, Larisa K. Vredevoe, Matthew R. Kuzma, Sera N. Ramadan, and Marc R. Zosky

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Season and Sex of Host Affect Intensities of Ectoparasites in Western Fence Lizards (Sceloporus Occidentalis) on the Central Coast of California, Anthony S. Lumbad, Larisa K. Vredevoe, and Emily N. Taylor

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Climate change, body size, and phenotype dependent dispersal, Shannon J. McCauley and Karen E. Mabry

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The deadly effects of ‘‘nonlethal’’ predators, Shannon J. McCauley, Locke Rowe, and Marie-Josee Fortin

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Physical habitat and social conditions across a coral reef shape spatial patterns of intraspecific behavioral variation in a demersal fish, Meagan N. Schrandt, Kristin M. Hardy, Kaitlin M. Johnson, and Sean C. Lema

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The proteomic response of sea squirts (genus Ciona) to acute heat stress: A global perspective on the thermal stability of proteins, Loredana Serafini, Jay B. Hann, Dietmar Kültz, and Lars Tomanek

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Observed and Modeled Bio-Optical, Bioluminescent, and Physical Properties During a Coastal Upwelling Event in Monterey Bay, California, Igor Shulman, Mark A. Moline, Bradley Penta, Stephanie Anderson, Matthew Oliver, and Steven H.D. Haddock

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Acquired Traits Revisited, William D. Stansfield

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Educational Curriculum Standards & Standardized Educational Tests: Comparing Apples & Oranges?, William D. Stansfield

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The Truth about Models: How Well Do Mechanical Models Mimic the Observed Gender Distributions in Two-Child Families?, William D. Stansfield and Matthew A. Carlton

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Environmental Proteomics: Changes in the Proteome of Marine Organisms in Response to Environmental Stress, Pollutants, Infection, Symbiosis, and Development, Lars Tomanek

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Utilizing Fishermen Knowledge and Expertise: Keys to Success for Collaborative Fisheries Research, Noëlle Yochum, Richard M. Starr, and Dean Wendt

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Distinct Microbiome in Pouchitis Compared to Healthy Pouches in Ulcerative Colitis and Familial Adenomatous Polyposis, Garrett C. Zella, Elizabeth J. Hait, Tiffany Glavan, Dirk Gevers, Doyle V. Ward, Christopher L. Kitts, and Joshua R. Korzenik

Submissions from 2010

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Zooplankton Avoidance of a Profiled Open-Path Fluorometer, Kelly J. Benoit-Bird, Mark A. Moline, Oscar M. Schofield, Ian C. Robbins, and Chad M. Waluk

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Integrated measurements of acoustical and optical thin layers I: Vertical scales of association, Kelly J. Benoit-Bird, Mark A. Moline, Chad M. Waluk, and Ian C. Robbins

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Platform effects on optical variability and prediction of underwater visibility, Grace Chang, Michael S. Twardowski, Yu You, Mark A. Moline, Peng-wang Zhai, Scott Freeman, Matthew Slivkoff, Francesco Nencioli, and George W. Kattawar

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Using on‐line data sources to allow students to test hypotheses about river flow and effects on remotely sensed coastal ocean properties., Lawrence B. Cohoon, Kristin M. Hardy, and Dustin M. Allen

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Turning crocodilian hearts into bird hearts: growth rates are similar for alligators with and without right-to-left cardiac shunt, John Eme, June Gwalthney, Tomasz Owerkowicz, Jason M. Blank, and James W. Hicks

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Barnacle Settlement and the Adhesion of Protein and Diatom Microfouling to Xerogel Films with Varying Surface Energy and Water Wettability, John A. Finlay, Stephanie M. Bennett, Lenora H. Brewer, Anastasiya Sokolova, Gemma Clay, Nikhil Gunari, Anne E. Meyer, Gilbert C. Walker, Dean E. Wendt, Maureen E. Callow, James A. Callow, and Michael R. Detty

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Designing Marine Reserve Networks for Both Conservation and Fisheries Management, Steven D. Gaines, Crow White, Mark H. Carr, and Stephen R. Palumbi

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Genome Size Is a Strong Predictor of Root Meristem Growth Rate, Adam Gruner, Nathan Hoverter, Tylia Smith, and Charles A. Knight

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Bioluminescence in the Sea, Steven H.D. Haddock, Mark A. Moline, and James F. Case

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The metabolic demands of swimming behavior influence the evolution of skeletal muscle fiber design in the brachyuran crab family Portunidae, Kristin M. Hardy, Sean C. Lema, and Stephen T. Kinsey

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Adaptive Divergence in the Thyroid Hormone Signaling Pathway in the Stickleback Radiation, Jun Kitano, Sean C. Lema, J. Adam Luckenbach, Seiichi Mori, Yui Kawagishi, Makoto Kusakabe, Penny Swanson, and Catherine L. Peichel

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Pismo Beach Fecal Contamination Source Identification Study: Final Report, Christopher L. Kitts, Michael W. Black, Mark M. Moline, Marie Yeung, Alice K. Hamrick, Ian C. Robbins, Andrew A. Schaffner, and Nathania I. Boutet

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Small Heat Shock Protein Responses Differ between Chaparral Shrubs from Contrasting Microclimates, Charles A. Knight

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On the Relationship between Pollen Size and Genome Size, Charles A. Knight, Rachel B. Clancy, Lars Götzenberger, Leighton Dann, and Jeremy M. Beaulieu

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Identification of multiple vasotocin receptor cDNAs in teleost fish: Sequences, phylogenetic analysis, sites of expression, and regulation in the hypothalamus and gill in response to hyperosmotic challenge, Sean C. Lema

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Diurnal rhythms of behavior and brain mRNA expression for arginine vasotocin, isotocin, and their receptors in wild Amargosa pupfish (Cyprinodon nevadensis amargosae), Sean C. Lema, Lauren J. Wagstaff, and Nina M. Gardner

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The Relationship between Plasma Steroid Hormone Concentrations and the Reproductive Cycle in the Northern Pacific Rattlesnake, Crotalus oreganus, Craig M. Lind, Jerry F. Husak, Cas Eikenaar, Ignacio T. Moore, and Emily N. Taylor

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The evolution of seeds, Ada Linkies, Kai Graeber, Charles A. Knight, and Gerhard Leubner-Metzger

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Body Size and Social Dominance Influence Breeding Dispersal in Male Pachydiplax longipennis (Odonata), Shannon McCauley

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Foraging Rates of Larval Dragonfly Colonists Are Positively Related to Habitat Isolation: Results from a Landscape-Level Experiment, Shannon J. McCauley, Tomas Brodin, and John Hammond

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Notonecta Exhibit Threat-Sensitive, Predator-Induced Dispersal, Shannon J. McCauley and Locke Rowe

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FLOWERING LOCUS C Influences the Timing of Shoot Maturation in Arabidopsis thaliana, Laurie Mentzer, Tarah Yee, Tina Y. Wang, and Edward Himelblau

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Correlated Evolution of Defensive and Nutritional Traits in Native and Non-Native Plants, Nicole Molinari and Charles A. Knight

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Integrated measurements of acoustical and optical thin layers II: Horizontal length scales, Mark A. Moline, Kelly J. Benoit-Bird, Ian C. Robbins, Maddie Schroth-Miller, Chad M. Waluk, and Brian Zelenke

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Grand Challenges in Comparative Physiology: Integration Across Disciplines and Across Levels of Biological Organization, Donald L. Mykles, Cameron K. Galambor, Jonathon H. Stillman, and Lars Tomanek

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Effects of Yogurt Starter Cultures on the Survival of Lactobacillus acidophilus, Elizabeth W. Ng, Marie Yeung, and Phillip S. Tong

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Meeting the Challenges: The Western Section's Role in Developing Tomorrow's Resource Management Professionals, John D. Perrine

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Sierra Nevada Red Fox (Vulpes vulpes necator): A Conservation Assessment, John D. Perrine, Lori A. Campbell, and Gregory A. Green

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Effects of Testosterone and Captivity on Medial and Dorsal Cortex Volumes and Neurogenesis in Adult Male Western Fence Lizards, Sceloporus occidentalis, D. R. Pfau, S. Y. Potter, D. F. Denardo, E. N. Taylor, and C. R. Strand

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North American montane red foxes: expansion, fragmentation, and the origin of the Sacramento Valley red fox, Benjamin N. Sacks, Mark J. Statham, John D. Perrine, Samantha M. Wisely, and Keith B. Aubry

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How Do Polar Marine Ecosystems Respond to Rapid Climate Change?, Oscar Schofield, Hugh W. Ducklow, Douglas G. Martinson, Michael P. Meredith, Mark A. Moline, and William R. Fraser

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Bacteria - The Last Stronghold of Lamarckism?, William D. Stansfield

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Layered Organization in the Coastal Ocean: An Introduction to Planktonic Thin Layers and the LOCO Project, James M. Sullivan, D. Van Holliday, Malcolm McFarland, Margaret A. McManus, Olivia M. Cheriton, Kelly J. Benoit-Bird, Louis Goodman, Zhankun Wang, John P. Ryan, Mark Stacey, Charles Greenlaw, and Mark A. Moline

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Hormones and Reproductive Cycles in Snakes, Emily N. Taylor and Dale F. Denardo

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The Role of Oxidative Stress in Setting Thermal Tolerance Limits in Mytilus, Lars Tomanek

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Variation in the Heat Shock Response and its Implication for Predicting the Effect of Global Climate Change on Species' Biogeographical Distribution Ranges and Metabolic Costs, Lars Tomanek

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Nonylphenol in Marine Organisms in North American Estuaries: Trophic Chain Accumulation and Proteomic Responses, Lars Tomanek, J. M. Diehl, S. E. Johnson, K. Xia, and S. J. Teh

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The Proteomic Response of Mytilus galloprovincialis and M. trossulus to Acute Temperature Stress, Lars Tomanek and Marcus Zuzow

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The Proteomic Response of the Mussel Congeners Mytilus gallaprovincialis and M. trossulus to Acute Heat Stress: Implications for Thermal Tolerance Limits and Metabolic Costs of Thermal Stress, Lars Tomanek and Marcus J. Zuzow

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Proteomic Analysis of the Purple Sea Urchin, Strongylocentrotus purpuratus, in Response to Acute Heat Stress, M. W. Webb, M. Devian, and L. Tomanek

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Ocean Currents Help Explain Population Genetic Structure, Crow White, Kimberly A. Selkoe, James Watson, David A. Siegel, Danielle C. Zacherl, and Robert J. Toonen

Submissions from 2009

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Phylogeography of the North American red fox: vicariance in Pleistocene forest refugia, Keith B. Aubry, Mark J. Statham, Benjamin N. Sacks, John D. Perrine, and Samantha M. Wisely

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Development, Implementation and Evaluation of a Data-assimilative Ocean Forecasting System off the Central California Coast, Yi Chao, Zhijin Li, John Farrara, James C. McWilliams, James Bellingham, Xavier Capet, Francisco Chavez, Jei-Kook Choi, Russ Davis, Jim Doyle, David M. Fratantoni, Peggy Li, Patrick Marchesiello, Mark A. Moline, Jeff Paduan, and Steve Ramp

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Surgical Removal of Right-to-Left Cardiac Shunt in the American Alligator (Alligator Mississippiensis) Causes Ventricular Enlargement But Does Not Alter Apnoea or Metabolism During Diving, John Eme, June Gwalthney, Jason M. Blank, Tomasz Owerkowicz, Gildardo Barron, and James W. Hicks

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Exhaustive Exercise Training Enhances Aerobic Capacity in American Alligator (Alligator Mississippiensis), John Eme, Tomasz Owerkowicz, June Gwalthney, Jason M. Blank, Bryan C. Rourke, and James W. Hicks

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First Record of the Extinct Sawfish Propristis Schweinfurthi Dames, 1883 (Batoidea: Pristiformes: Pristidae) from the Middle Eocene of Spain, Francesc Farrés and Harry L. Fierstine

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Hydrothermal and thermal time models for the invasive grass, Arundo donax, Anthony Graziani and Scott J. Steinmaus

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Forward and Reverse Genetics of Rapid-Cycling Brassica oleracea, Edward Himelblau, Laurie Mentzer, Erin J. Gilchrist, Kelly Buono, Colleen Bizzell, Robert Vogelzang, Thomas Osborn, Richard M. Amasino, Isobel A.P. Parkin, and George W. Haughn

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Food availability and parasite infection influence mating tactics in guppies (Poecilia reticulata), Gita R. Kolluru, Gregory F. Grether, Eric Dunlop, and Sandra H. South

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Thyroid hormone regulation of mRNAs encoding thyrotropin β-subunit, glycoprotein α-subunit, and thyroid hormone receptors α and β in brain, pituitary gland, liver, and gonads of an adult teleost, Pimephales promelas, Sean C. Lema, Jon T. Dickey, Irvin R. Schultz, and Penny Swanson