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Submissions from 2005

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A Multi-platform Bathyphotometer for Fine-Scale, Coastal Bioluminescence Research, Christen M. Herren, Steven H.D. Haddock, Cyril Johnson, Cristina M. Orrico, Mark A. Moline, and James F. Case

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Correct Author Citation for Cirsium eatonii var. Eriocephalum (Asteraceae: Cardueae), David J. Keil

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Does intracellular metabolite diffusion limit post-contractile recovery in burst locomotor muscle?, Stephen T. Kinsey, Pragyansri Pathi, Kristin M. Hardy, Amanda Jordan, and Bruce R. Locke

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The Large Genome Constraint Hypothesis: Evolution, Ecology and Phenotype, Charles A. Knight, Nicole A. Molinari, and Dmitri A. Petrov

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The effects of resource availability on alternative mating tactics in guppies (Poecilia reticulata), Gita R. Kolluru and Gregory F. Grether

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Proliferation zones in the salmon telencephalon and evidence for environmental influence on proliferation rate, Sean C. Lema, Mark J. Hodges, Michael P. Marchetti, and Gabrielle A. Nevitt

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Genetic Analysis of Two Bile Salt Hydrolase Activities in Lactobacillus acidophilus NCFM, Olivia McAuliffe, Raul J. Cano, and Todd R. Klaenhammer

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Relationship Between Habitat Distribution, Growth Rate, and Plasticity in Congeneric Larval Dragonflies, S. J. McCauley

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Integration of Flowering Signals in Winter-Annual Arabidopsis, Scott D. Michaels, Edward Himelblau, Sang Yeol Kim, Fritz M. Schomburg, and Richard M. Amasino

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Adaptive Sampling of Phytoplankton Responses to Episodic Physical Forcing in the Nearshore Coastal Ocean, Mark A. Moline

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An Autonomous Vehicle Approach for Quantifying Bioluminescence in Ports and Harbors, Mark A. Moline, Paul Bissett, Shelley Blackwell, James Mueller, Jeff Sevadjian, Charles Trees, and Ron Zaneveld

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Taxonomic Revision and Stratigraphic Provenance of Histiophorus rotundus Woodward 1901 (Teleostei, Perciformes), Kenneth A. Monsch, Harry L. Fierstine, and Robert E. Weems

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Select Listeria monocytogenes Subtypes Commonly Found in Foods Carry Distinct Nonsense Mutations in inlA, Leading to Expression of Truncated and Secreted Internalin A, and Are Associated with a Reduced Invasion Phenotype for Human Intestinal Epithelial Cells, K. K. Nightingale, K. Windham, K. E. Martin, M. Yeung, and M. Wiedmann

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Microbial Activity of Soil Following Steam Treatment, Barbara Orchard, Yarrow M. Nelson, Lynne Maloney, Christopher L. Kitts, and Paul Lundegard

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The Bell Family Legacies, William D. Stansfield

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Hybrid Xerogel Films as Novel Coatings for Antifouling and Fouling Release, Ying Tang, John A. Finlay, Gregory L. Kowalke, Anne E. Meyer, Frank V. Bright, Maureen E. Callow, James A. Callow, Dean E. Wendt, and Michael R. Detty

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Sexual Size Dimorphism and Growth Plasticity in Snakes: an Experiment on the Western Diamond‐Backed Rattlesnake (Crotalus atrox), Emily N, Taylor and Dale F. Denardo

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Effects of Food Supplementation on the Physiological Ecology of Female Western Diamond‐Backed Rattlesnakes (Crotalus atrox), Emily N. Taylor, Michael A. Malawy, Dawn M. Browning, Shea V. Lemar, and Dale F. DeNardo

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Two-Dimensional Gel Analysis of the Heat-Shock Response in Marine Snails (genus Tegula): Interspecific Variation in Protein Expression and Acclimation Ability, Lars Tomanek

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Monitoring Water Transparency and Diver Visibility in Ports and Harbors Using Aircraft Hyperspectral Remote Sensing, Charles C. Trees, Paul W. Bissett, Heidi Dierssen, David D.R. Kohler, Mark A. Moline, James L. Mueller, Richard E. Pieper, Michael S. Twardowski, and J. Ronald V. Zaneveld

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The Metalloprotease of Listeria monocytogenes Controls Cell Wall Translocation of the Broad-Range Phospholipase C, P.S. Marie Yeung, Nicholas Zagorski, and Helene Marquis

Submissions from 2004

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Identification and phenotypic characterization of the cell-division protein CdpA, Eric Altermann, B. Logan Buck, Raul Cano, and Todd R. Klaenhammer

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Identification and Inactivation of Genetic Loci Involved with Lactobacillus acidophilus Acid Tolerance, M. Andrea Azcarate-Peril, Eric Altermann, Rebecca L. Hoover- Fitzula, Raul J. Cano, and Todd R. Klaenhammer

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In Situ Cardiac Performance of Pacific Bluefin Tuna Hearts in Response to Acute Temperature Change, Jason M. Blank, Jeffery M. Morrissette, Ana M. Landeira-Fernandez, Susanna B. Blackwell, Thomas D. Williams, and Barbara A. Block

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Complete Genomic Sequence of Bacteriophage B3, a Mu-Like Phage of Pseudomonas aeruginosa, Michael D. Braid, Jennifer L. Silhavy, Christopher L. Kitts, Raul J. Cano, and Martha M. Howe

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The New Age of Hyperspectral Oceanography, Grace Chang, Kevin Mahoney, Amanda Briggs-Whitmire, David Kohler, Curtis Mobley, Marlon Lewis, Mark A. Moline, Emmanuel Boss, Minsu Kim, William Philpot, and Tommy Dickey

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Biogeochemical Impact of Summertime Coastal Upwelling on the New Jersey Shelf, Scott Glenn, Robert Arnone, Trisha Bergmann, Paul W. Bissett, Michael Crowley, Jay Cullen, Joe Gryzmski, Dale Haidvogel, Josh Kohut, Mark A. Moline, Mathew Oliver, Cris Orrico, Robert Sherrell, Tony Song, Alan Weidemann, Robert Chant, and Oscar Schofield

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Micrococcus luteus - Survival in Amber, C. L. Greenblatt, J. Baum, B. Y. Klein, S. Nachshon, V. Koltunov, and R. J. Cano

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Sex–specific effects of carotenoid intake on the immunological response to allografts in guppies (Poecilia reticulata), Gregory F. Grether, Shinji Kasahara, Gita R. Kolluru, and Edwin L. Cooper

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Individual colour patches as multicomponent signals, Gregory F. Grether, Gita R. Kolluru, and Karen Nersissian

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Bacterial Succession in a Petroleum Land Treatment Unit, Christopher W. Kaplan and Christopher L. Kitts

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New Taxa and New Combinations in North American Cirsium (Asteraceae: Cardueae), David J. Keil

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Sex differences in metabolic rates in field crickets and their dipteran parasitoids, Gita R. Kolluru, Mark A. Chappell, and Marlene Zuk

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Evidence that thyroid hormone induces olfactory cellular proliferation in salmon during a sensitive period for imprinting, Sean C. Lema and Gabrielle A. Nevitt

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Exogenous vasotocin alters aggression during agonistic exchanges in male Amargosa River pupfish (Cyprinodon nevadensis amargosae), Sean C. Lema and Gabrielle A. Nevitt

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Variation in vasotocin immunoreactivity in the brain of recently isolated populations of a death valley pupfish, Cyprinodon nevadensis, Sean C. Lema and Gabrielle A. Nevitt

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Characterization of Aerobic and Anaerobic Microbial Activity in Hydrocarbon-Contaminated Soil, Lynne C. Maloney, Yarrow M. Nelson, and Christopher L. Kitts

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Variability in Spectral Backscatter Estimated from Satellites and its Relation to in situ Measurements in Optically Complex Coastal Waters, Mark A. Moline, Robert Arnone, Trisha Bergmann, Scott Glenn, Matthew J. Oliver, Cristina Orrico, Oscar Schofield, and Sasha Tozzi

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Episodic Physical Forcing and the Structure of Phytoplankton Communities in the Coastal Waters of New Jersey, Mark A. Moline, Shelley M. Blackwell, Robert Chant, Matthew J. Oliver, Trisha Bergmann, Scott Glenn, and Oscar M.E. Schofield

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Alteration of the Food Web Along the Antarctic Peninsula in Response to a Regional Warming Trend, Mark A. Moline, Herve Claustre, Thomas K. Frazer, Oscar Schofield, and Maria Vernet

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Bioinformatic Approaches For Objective Detection of Water Masses on Continental Shelves, Mark A. Moline, Matthew J. Oliver, Scott Glenn, Josh T. Kohut, Andrew J. Irwin, Oscar M. Schofield, and Paul W. Bissett

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Deriving In Situ Phytoplankton Absorption for Bio-Optical Productivity Models in Turbid Waters, Christina Orrico, Matthew J. Oliver, Oscar Schofield, Trisha Bergmann, Scott Glenn, and Mark A. Moline

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Physical Forcing of Phytoplankton Community Structure and Primary Production in Continental Shelf Waters of the Western Antarctic Peninsula, Barbara B. Prezelin, Eileen E. Hofmann, Mark A. Moline, and John M. Klinck

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Fossil Tuna Vertebrae Punctured by Istiophorid Billfishes, Vincent P. Schneider and Harry L. Fierstine

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Watercolors in the Coastal Zone: What Can We See?, Oscar Schofield, Robert A. Arnone, W. Paul Bissett, Tommy D. Dickey, Curtis O. Davis, Zoe Finkel, Matthew Oliver, and Mark A. Moline

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Hamlet Revisited: How Evolution Really Works, William D. Stansfield

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Bayesian Statistics for Biological Data: Pedigree Analysis, William D. Stansfield and Matthew A. Carlton

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Diploid and Polyploid Cytotype Distribution in Melampodium cinereum and M. leucanthum (Asteraceae, Heliantheae), Tod F. Stuessy, Hanna Weiss-Schneeweiss, and David J. Keil

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Seasonal Steroid Hormone Levels and Their Relation to Reproduction in the Western Diamond-Backed Rattlesnake, Crotalus atrox (Serpentes: Viperidae), Emily N. Taylor, Dale F. DeNardo, and David H. Jennings

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A Comparison Between Point- And Semi-Continuous Sampling For Assessing Body Temperature In A Free-Ranging Ectotherm, Emily N. Taylor, Dale F. DeNardo, and Michael A. Malawy

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Variability in Measured and Modelled Remote Sensing Reflectance for Coastal Waters at LEO-5, Sasha Tozzi, Oscar Schofield, Trisha Bergmann, Mark A. Moline, and Robert Arnone

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Effects of Acid Stress on Vibrio parahaemolyticus Survival and Cytotoxicity, P.S. Marie Yeung and Kathryn J. Boor

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Epidemiology, Pathogenesis, and Prevention of Foodbome Vibrio parahaemolyticus Infections, P.S. Marie Yeung and Kathryn J. Boor

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Application of Genotypic and Phenotypic Analyses to Commercial Probiotic Strain Identity and Relatedness, P. S. M. Yeung, Christopher L. Kitts, Phillip S. Tong, and M. E. Sanders

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Application of Genotypic and Phenotypic Analyses to Commerical Probiotic Strain Identity and Relatedness, P.S.M. Yeung, C. L. Kitts, R. Cano, and P. Tong

Submissions from 2003

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Development of Endospore-Specific Primers for the Analysis of Microbial Populations in Milk Powder, M. M. Arendts, Chris Kitts, and Rafael Jiménez-Flores

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Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus, Rodolphe Barrangou, Eric Altermann, Robert Hutkins, Raul J. Cano, and Todd Klaenhammer

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Removal of PCR Inhibitors From Soil DNA by Chemical Flocculation, Michael D. Braid, Laura M. Daniels, and Christopher L. Kitts

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Chromosome-Wide Control of Meiotic Crossing over in C. elegans, Kenneth J. Hillers and Anne M. Villeneuve

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Complex Co-Substrate Addition Increases Initial Petroleum Degradation Rates During Land Treatment by Altering Bacterial Community Physiology, Christopher W, Kaplan; Brian G. Clement; Alice Hamrick; Robert W. Pease; Carl Flint; Raul J. Cano; and Christopher L. Kits

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Variation Between Observed and True Terminal Restriction Fragment Length is Dependent on True TRF Length and Purine Content, Christopher W. Kaplan and Christopher L. Kitts

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Continuous Hyperspectral Absorption Measurements of Colored Dissolved Organic Material in Aquatic Systems, Gary J. Kirkpatrick, Cristina Orrico, Mark A. Moline, Matthew Oliver, and Oscar M. Schofield

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Evolution and plasticity of photosynthetic thermal tolerance, specific leaf area and leaf size: congeneric species from desert and coastal environments, Charles A. Knight and David D. Ackerly

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Small heat shock protein responses of a closely related pair of desert and coastal Encelia, Charles A. Knight and David D. Ackerly

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When Does a Reproducing Female Viper (Vipera aspis) ‘Decide’ on her Litter Size?, Olivier Lourdais, Xavier Bonnet, Richard Shine, and Emily N. Taylor

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Monitoring Spores and Spore-Forming Bacteria Populations in Commercial Skim Milk Powder Production Plants Using Conventional and Molecular Methods, C. Murillo, Chris Kitts, and Rafael Jiménez-Flores

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Characterization of Six Polymorphic Microsatellites for the Polychaete Tubeworm Hydroides elegans and Cross-Species Amplification in the Congener Hydroides hexagonus, J. B. Pettengill, M. G. Hadfield, M. D. Schug, and D. E. Wendt

Silicone Foul Release Coatings: Effect of the Interaction of Oil and Coating Functionalities on the Magnitude of Macrofouling Attachment Strengths, Judith Stein, Kathryn Truby, Christina Darkangelo Wood, Jeff Stein, Martha Gardner, Geoffrey Swain, Christopher Kavanagh, Brett Kovach, Michael Schultz, Deborah Wiebe, Eric Holm, Jean Montemarano, Dean Wendt, Celia Smith, and Anne Meyer

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Structure-Property Relationships of Silicone Biofouling-Release Coatings: Effect of Silicone Network Architecture on Pseudobarnacle Attachment Strengths, Judith Stein, Kathryn Truby, Christina Darkangelo Wood, Michael Takemori, Michael Vallance, Geoffrey Swain, Christopher Kavanagh, Brett Kovach, Michael Schultz, Deborah Wiebe, Eric Holm, Jean Montemarano, Dean Wendt, Celia Smith, and Anne Meyer

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Heat-Shock Protein 70 (Hsp70) as a Biochemical Stress Indicator: An Experimental Field Test in Two Congeneric Intertidal Gastropods (Genus: Tegula), Lars Tomanek and Eric Sanford

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Phenotype management: a new approach to habitat restoration, Jason V. Watters, Sean C. Lema, and Gabrielle A. Nevitt

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A PCR Assay for Specific Detection of the Pandemic Vibrio parahaemolyticus O3:K6 Clone from Shellfish, P.S. Marie Yeung, A. DePaola, C. A. Kaysner, and K. J. Boor

Submissions from 2002

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Leaf size, specific leaf area and microhabitat distribution of chaparral woody plants: contrasting patterns in species level and community level analyses, D. D. Ackerly, Charles A. Knight, S. B. Weiss, K. Barton, and K. P. Starmer

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Effects of Temperature, Epinephrine and Ca2+ on the Hearts of Yellowfin Tuna (Thunnus Albacares), Jason M. Blank, Jeffery M. Morrissette, Peter S. Davie, and Barbara A. Block

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Nearshore Physical Processes and Bio-Optical Properties in the New York Bight, G. C. Chang, T. D. Dickey, Oscar M. Schofield, A. D. Weidemann, E. Boss, W. S. Pegau, Mark A. Moline, and Scott M. Glenn

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LitR, a new transcriptional activator in Vibrio fischeri, regulates luminescence and symbiotic light organ colonization, Pat Fidopiastis, Carol M. Miyamoto, Michael G. Jobling, Edward A. Meighen, and Edward G. Ruby

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Two New Species of Pectis (Asteraceae: Tageteae) from South America, David J. Keil

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Discovering lactic acid bacteria by genomics, Todd Klaenhammer, Eric Altermann, Fabrizio Arigoni, Alexander Bolotin, Fred Breidt, Jeffrey Broadbent, Raul J. Cano, Stephane Chaillou, Josef Deutscher, Mike Gasson, Maarten van de Guchte, Jean Guzzo, Axel Hartke, Trevor Hawkins, Pascal Hols, Robert Hutkins, Michiel Kleerebezem, Jan Kok, Oscar Kuipers, Mark Lubbers, Emmanuelle Maguin, Larry McKay, David Mills, Arjen Nauta, Ross Overbeek, Herman Pel, David Pridmore, Milton Saier, Douwe van Sinderen, Alexei Sorokin, James Steele, Daniel O'Sullivan, Willem de Vos, Bart Weimer, Monique Zagorec, and Roland Siezen

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An ecological and evolutionary analysis of photosynthetic thermotolerance using the temperature-dependent increase in fluorescence, Charles A. Knight and David D. Ackerly

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Variation in nuclear DNA content across environmental gradients: a quantile regression analysis, Charles A. Knight and David D. Ackerly

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Reduced reproductive effort in male field crickets infested with parasitoid fly larvae, Gita R. Kolluru, Marlene Zuk, and Mark A. Chappell

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The Production of Communication Signals at the Air–Water and Water–Substrate Boundaries, Sean C. Lema and John T. Kelly

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Assessment of Fungal Diversity Using Terminal Restriction Fragment (TRF) Pattern Analysis: Comparison of 18S and ITS Ribosomal Regions, N. S. Lord, Christopher W. Kaplan, P. Shank, Christopher L. Kitts, and Susan L. Elrod

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Chaperones as Buffering Agents?, Thomas Mitchell-Olds and Charles A. Knight

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A New AUV Platform for Studying Near Shore Bioluminescence Structure, Mark A. Moline, S. Blackwell, J. Case, S. Glenn, J. Kohut, O. Schofield, M. Purcell, and C. Vonalt

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The Detection of Bacillus Endospores During Low Heat Skim Milk Powder Processing Using Nucleic Acid Technology, Amy J. Rife, Rafael Jiménez-Flores, Chris Kitts, and Mark Kubinski

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The Long-term Ecosystem Observatory: An Integrated Coastal Observatory, Oscar Schofield, Trisha Bergmann, Paul Bissett, J. Frederick Grassle, Dale B. Haidvogel, Josh Kohut, Mark A. Moline, and Scott M. Glenn

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Occam's Razor & The Nature of Scientific Theories, William D. Stansfield

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Predicting Plant Invasion with Modeling, Scott J. Steinmaus

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The Heat-Shock Response: Its Variation, Regulation and Ecological Importance in Intertidal Gastropods (Genus Tegula), Lars Tomanek

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Interspecific- and Acclimation-Induced Variation in Levels of Heat-Shock Proteins 70 (hsp70) and 90 (hsp90) and Heat-Shock Transcription Factor-1 (HSF1) in Congeneric Marine Snails (Genus Tegula): Implications for Regulation of hsp Gene Expression, Lars Tomanek and George N. Somero

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Species-Specific Identification of Commercial Probiotic Strains, Marie Yeung, M. E. Sanders, Christopher L. Kitts, Raul Cano, and Phillip S. Tong

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Comparative Phenotypic, Molecular, and Virulence Characterization of Vibrio parahaemolyticus O3:K6 Isolates, P.S. Marie Yeung, Micaela C. Hayes, Angelo DePaola, Charles A. Kaysner, and Laura Kornstein

Submissions from 2001

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Optical Remote Sensing Techniques in Biological Oceanography, W. Paul Bissett, Oscar Schofield, Curtis D. Mobley, Michael F. Crowley, and Mark A. Moline

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Invasion genetics of New World medflies: testing alternative colonization scenarios, Andrew J. Bohonak, Neil Davies, Francis X. Villablanca, and George K. Roderick

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Analysis and New Records of Billfish (Teleostei: Perciformers: Istiophoridae) from the Yorktown Formation, Early Pliocene of Eastern North Carolina at Lee Creek Mine, Harry L. Fierstine

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A new Aglyptorhynchus (Perciformes: Scombroidei: Blochiidae) from the late Oligocene of Oregon, Harry L. Fierstine

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A Fossil Blue Marlin (Makaira nigricans Lacépède) from the Middle Facies of the Trinidad Formation (Upper Miocene to Upper Pliocene), San José del Cabo Basin, Baja California Sur, México, Harry L. Fierstine, Shelton P. Applegate, Gerardo González-Barba, Tobias Schwennicke, and Luis Espinosa-Arrubarrena

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Modeling Atmosphere-Ocean Interactions and Primary Productivity, Joe Grzymski, Mark A. Moline, and Jay T. Cullen

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The Scientific Foundations of Habitat Conservation Plans: a Quantitative Assessment, Elaine K. Harding, Elizabeth E. Crone, Bret D. Elderd, Jonathan M. Hoekstra, Alexa J. McKerrow, John D. Perrine, Jim Regetz, Leslie J. Rissler, Amanda G. Stanley, Eric L. Walters, and Nceas Habitat Conservation Plan Working Group